CTNND1 Catenin delta 1 O60716 CTND1_HUMAN
Protein Coding Chr 11 11q12.1 Swiss-Prot reviewed Entrez 1500
Mutations
13,083
CL 1,706 · Tissue 11,133
Samples
476
CL 96 · Tissue 373
Peptides
425
unique mutant peptides
Transcripts
30
isoforms mutated

Stats by Source

Global, split by cell line (COSMIC CL / DepMap / PubMed) vs tissue (COSMIC primary tissue)

How the counts split by source
Stats by Source

Global = all mutations for this gene across every source.

Cell line = COSMIC Cell Lines Project + DepMap + PubMed.

Tissue = COSMIC primary-tissue (patient tumour) samples.

Global can exceed cell line + tissue: COSMIC tissue-derived models sit only in global, and a peptide can be shared across both.

GlobalCell lineTissue
Mutations13,0831,70611,133
Samples47696373
Peptides42573361

Function

CTNND1 · Catenin delta 1

This gene encodes a member of the Armadillo protein family, which function in adhesion between cells and signal transduction. Multiple translation initiation codons and alternative splicing result in many different isoforms being translated. Not all of the full-length natures of the described transcript variants have been determined. Read-through transcription also exists between this gene and the neighboring upstream thioredoxin-related transmembrane protein 2 (TMX2) gene. [provided by RefSeq, Dec 2010].

Isoforms & Proteins

30 transcripts · UniProt mapping is sequence-verified (AA-safe)

About the isoform mapping
Isoforms & Proteins

Each Ensembl transcript (ENST) this gene is mutated on, with its matched UniProt accession.

The mapping is sequence-verified: the UniProt sequence is identical to the transcript translation, so amino-acid positions line up exactly. A * marks an unreviewed (TrEMBL) entry.

Counts are mutations and unique mutant peptides on each transcript.

TranscriptUniProtMutationsPeptides
ENST00000399050 O60716 538 388
ENST00000361332 O60716-2 486 370
ENST00000361796 O60716-3 482 366
ENST00000529919 C9JZR2* 482 366
ENST00000358694 O60716-5 478 362
ENST00000428599 O60716-5 478 362
ENST00000524630 O60716-5 478 362
ENST00000361391 O60716-6 477 363
ENST00000526938 O60716-7 473 359
ENST00000532844 O60716-9 468 359
ENST00000526357 O60716-10 464 355
ENST00000530748 O60716-11 460 351
ENST00000534579 O60716-13 457 347
ENST00000528621 O60716-13 456 347
ENST00000529526 O60716-13 456 347
ENST00000532649 O60716-13 456 347
ENST00000529873 O60716-14 455 348
ENST00000415361 O60716-17 443 339
ENST00000530094 O60716-18 439 335
ENST00000528232 O60716-19 435 331
ENST00000426142 O60716-21 431 327
ENST00000529986 O60716-21 431 327
ENST00000532245 O60716-21 431 327
ENST00000532463 O60716-21 431 327
ENST00000532787 O60716-22 430 328
ENST00000527467 O60716-25 321 256
ENST00000531014 O60716-26 317 252
ENST00000525902 O60716-27 313 248
ENST00000526772 O60716-29 309 244
ENST00000533667 O60716-30 308 245

Gene Properties

Type
Protein Coding
Chromosome
11
Cytoband
11q12.1
Entrez ID
Aliases
BCDS2CASCTNNDP120CASP120CTNp120

Recurrent Mutations

Top recurrent amino-acid changes along the protein · needle height = number of mutations

What this lollipop shows
Recurrent Mutations

A lollipop / needle plot – the standard way to show recurrent mutations along a protein (as used by cBioPortal and MutationMapper).

X-axis = amino-acid position in the protein.

Needle height & head size = how often that exact amino-acid change was observed (its recurrence). Tall/large heads are mutational hotspots.

The most recurrent changes are labelled; hover any needle for the change, position and counts.

Mutation Distribution

Where CTNND1 is mutated · all tissues, split by cell line vs tissue

Mutation counts by tissue
Mutation Distribution

How many mutations in CTNND1 were found in each tissue, across the whole database.

Each bar is a tissue (cell-line and tissue names are merged to the standard tissue), split into cell line and tissue (patient tumour) contributions.

This shows the cancer-context where this gene is recurrently altered.

GTEx Expression

Median TPM across 54 healthy tissues

GTEx Portal ↗
About the expression data
GTEx Expression

Median gene expression (TPM) in normal, non-cancer human tissues from the GTEx project.

Useful for judging tumour specificity – a strong neoantigen target ideally comes from a gene with low expression in healthy tissues.

Scroll or drag the mini-axis below the chart to browse all tissues.

Mutations

All 13,083 mutations in CTNND1

About the mutation list
Mutations

Every mutation record for this gene, across all samples and sources.

The Sample column links to the cell line (cell-line samples) or the tissue type (tissue samples).

Use the Type / Source filters, the search box, and column sorting to explore; each CAN-IMMUNE ID opens the full mutation & peptide view.

IDSampleTranscriptAA Change CDSTypeSourcePeptide