Stats by Source
Total, split by cell line (COSMIC CL / DepMap / PubMed) vs tissue (COSMIC primary tissue)
Total = all mutations for this gene across every source.
Cell line = COSMIC Cell Lines Project + DepMap + PubMed.
Tissue = COSMIC primary-tissue (patient tumour) samples.
Total can exceed cell line + tissue: COSMIC tissue-derived models sit only in global, and a peptide can be shared across both.
| Total | Cell line | Tissue | |
|---|---|---|---|
| Mutations | 561 | 98 | 453 |
| Samples | 514 | 93 | 412 |
| Peptides | 363 | 58 | 316 |
Function
MNDA · Myeloid cell nuclear differentiation antigen
The myeloid cell nuclear differentiation antigen (MNDA) is detected only in nuclei of cells of the granulocyte-monocyte lineage. A 200-amino acid region of human MNDA is strikingly similar to a region in the proteins encoded by a family of interferon-inducible mouse genes, designated Ifi-201, Ifi-202, and Ifi-203, that are not regulated in a cell- or tissue-specific fashion. The 1.8-kb MNDA mRNA, which contains an interferon-stimulated response element in the 5-prime untranslated region, was significantly upregulated in human monocytes exposed to interferon alpha. MNDA is located within 2,200 kb of FCER1A, APCS, CRP, and SPTA1. In its pattern of expression and/or regulation, MNDA resembles IFI16, suggesting that these genes participate in blood cell-specific responses to interferons. [provided by RefSeq, Jul 2008].
Isoforms & Proteins
1 transcript · UniProt mapping is sequence-verified (AA-safe)
Each Ensembl transcript (ENST) this gene is mutated on, with its matched UniProt accession.
The mapping is sequence-verified: the UniProt sequence is identical to the transcript translation, so amino-acid positions line up exactly. A * marks an unreviewed (TrEMBL) entry.
Counts are mutations and unique mutant peptides on each transcript.
| Transcript | UniProt | Mutations | Peptides |
|---|---|---|---|
| ENST00000368141 | P41218 | 561 | 363 |
Gene Properties
Recurrent Mutations
All 363 amino-acid changes on canonical ENST00000368141 · needle height = samples · drag the mini-map to zoom
A lollipop / needle plot – the standard way to show recurrent mutations along a protein (as used by cBioPortal and MutationMapper).
X-axis = amino-acid position in the protein.
Needle height & head size = how often that exact amino-acid change was observed (its recurrence). Tall/large heads are mutational hotspots.
The most recurrent changes are labelled; hover any needle for the change, position and counts.
Mutation frequency across cancer types
% of samples with a missense/complex mutation in MNDA · cell line vs tissue
For each cancer type, the fraction of samples that carry at least one missense/complex mutation anywhere in MNDA – counted as distinct samples (a sample counts once no matter how many mutations it has).
Split into cell line and tissue; each cell shows mutated / total and the percentage. Cohorts with <20 samples are omitted. Ordered by combined frequency.
| Cancer type | Cell lines | Tissue samples |
|---|---|---|
| Endometrial Carcinoma | 3/42 7% | 28/612 5% |
| Chronic Myelogenous Leukemia | 1/25 4% | 0/0 0% |
| Non-Small Cell Lung Carcinoma | 26/304 9% | 40/1390 3% |
| Melanoma | 5/210 2% | 69/1899 4% |
| Squamous Cell Lung Carcinoma | 3/57 5% | 25/810 3% |
| Rhabdomyosarcoma | 6/33 18% | 0/171 0% |
| Gastric Carcinoma | 4/74 5% | 37/1809 2% |
| Germ Cell Tumour | 4/25 16% | 0/169 0% |
| Other Solid Cancers | 1/94 1% | 30/1515 2% |
| Colorectal Carcinoma | 13/143 9% | 47/3239 1% |
| Small Cell Lung Carcinoma | 0/9 0% | 12/752 2% |
| Bladder Carcinoma | 1/58 2% | 13/956 1% |
| Neuroendocrine Tumour | 4/154 3% | 3/577 1% |
| Head and Neck Carcinoma | 4/85 5% | 11/1574 1% |
| Cervical Carcinoma | 1/35 3% | 3/422 1% |
| Ovarian Carcinoma | 1/109 1% | 8/998 1% |
| Esophageal Carcinoma | 0/23 0% | 6/769 1% |
| Other Sarcomas | 0/69 0% | 5/699 1% |
| Pancreatic Carcinoma | 0/89 0% | 10/1611 1% |
| Hepatocellular Carcinoma | 1/46 2% | 11/2210 0% |
| Prostate Carcinoma | 1/13 8% | 10/2105 0% |
| Thyroid Gland Carcinoma | 1/45 2% | 7/1592 0% |
| Osteosarcoma | 1/45 2% | 0/166 0% |
| Esophageal Squamous Cell Carcinoma | 2/51 4% | 10/2550 0% |
| Biliary Tract Carcinoma | 1/54 2% | 3/950 0% |
| Meningioma | 0/3 0% | 1/252 0% |
| B-Cell Non-Hodgkins Lymphoma | 4/88 5% | 5/2534 0% |
| Ewings Sarcoma | 0/63 0% | 1/262 0% |
| Plasma Cell Myeloma | 1/44 2% | 0/305 0% |
| Breast Carcinoma | 3/144 2% | 7/3264 0% |
Mutation Distribution
Where MNDA is mutated · all tissues, split by cell line vs tissue
How many mutations in MNDA were found in each tissue, across the whole database.
Each bar is a tissue (cell-line and tissue names are merged to the standard tissue), split into cell line and tissue (patient tumour) contributions.
This shows the cancer-context where this gene is recurrently altered.
GTEx Expression
Median TPM across 54 healthy tissues
Median gene expression (TPM) in normal, non-cancer human tissues from the GTEx project.
Useful for judging tumour specificity – a strong neoantigen target ideally comes from a gene with low expression in healthy tissues.
Scroll or drag the mini-axis below the chart to browse all tissues.
Mutations
All 561 mutations in MNDA
Every mutation record for this gene, across all samples and sources.
The Sample column links to the cell line (cell-line samples) or the tissue type (tissue samples).
Use the Type / Source filters, the search box, and column sorting to explore; each CAN-IMMUNE ID opens the full mutation & peptide view.
| ID | Sample | Transcript | AA Change | CDS | Type | Source | Mutant Peptide | Wild-type Peptide |
|---|