PHTF2 Putative homeodomain transcription factor 2 Q8N3S3 PHTF2_HUMAN
Protein Coding Chr 7 7q11.23-q21.11 Swiss-Prot reviewed Entrez 57157
Mutations
1,726
CL 263 · Tissue 1,412
Samples
287
CL 68 · Tissue 211
Peptides
251
unique mutant peptides
Transcripts
8
isoforms mutated

Stats by Source

Global, split by cell line (COSMIC CL / DepMap / PubMed) vs tissue (COSMIC primary tissue)

How the counts split by source
Stats by Source

Global = all mutations for this gene across every source.

Cell line = COSMIC Cell Lines Project + DepMap + PubMed.

Tissue = COSMIC primary-tissue (patient tumour) samples.

Global can exceed cell line + tissue: COSMIC tissue-derived models sit only in global, and a peptide can be shared across both.

GlobalCell lineTissue
Mutations1,7262631,412
Samples28768211
Peptides25147206

Function

PHTF2 · Putative homeodomain transcription factor 2

Located in endoplasmic reticulum. [provided by Alliance of Genome Resources, Apr 2022]

Isoforms & Proteins

8 transcripts · UniProt mapping is sequence-verified (AA-safe)

About the isoform mapping
Isoforms & Proteins

Each Ensembl transcript (ENST) this gene is mutated on, with its matched UniProt accession.

The mapping is sequence-verified: the UniProt sequence is identical to the transcript translation, so amino-acid positions line up exactly. A * marks an unreviewed (TrEMBL) entry.

Counts are mutations and unique mutant peptides on each transcript.

TranscriptUniProtMutationsPeptides
ENST00000422959 Q8N3S3-2 289 224
ENST00000248550 Q8N3S3 259 218
ENST00000416283 Q8N3S3 259 218
ENST00000307305 Q8N3S3-3 253 213
ENST00000275575 Q8N3S3-4 236 198
ENST00000424760 Q8N3S3-7 184 155
ENST00000415251 Q8N3S3-6 123 102
ENST00000450574 Q8N3S3-5 123 102

Gene Properties

Type
Protein Coding
Chromosome
7
Cytoband
7q11.23-q21.11
Entrez ID

Recurrent Mutations

Top recurrent amino-acid changes along the protein · needle height = number of mutations

What this lollipop shows
Recurrent Mutations

A lollipop / needle plot – the standard way to show recurrent mutations along a protein (as used by cBioPortal and MutationMapper).

X-axis = amino-acid position in the protein.

Needle height & head size = how often that exact amino-acid change was observed (its recurrence). Tall/large heads are mutational hotspots.

The most recurrent changes are labelled; hover any needle for the change, position and counts.

Mutation Distribution

Where PHTF2 is mutated · all tissues, split by cell line vs tissue

Mutation counts by tissue
Mutation Distribution

How many mutations in PHTF2 were found in each tissue, across the whole database.

Each bar is a tissue (cell-line and tissue names are merged to the standard tissue), split into cell line and tissue (patient tumour) contributions.

This shows the cancer-context where this gene is recurrently altered.

GTEx Expression

Median TPM across 54 healthy tissues

GTEx Portal ↗
About the expression data
GTEx Expression

Median gene expression (TPM) in normal, non-cancer human tissues from the GTEx project.

Useful for judging tumour specificity – a strong neoantigen target ideally comes from a gene with low expression in healthy tissues.

Scroll or drag the mini-axis below the chart to browse all tissues.

Mutations

All 1,726 mutations in PHTF2

About the mutation list
Mutations

Every mutation record for this gene, across all samples and sources.

The Sample column links to the cell line (cell-line samples) or the tissue type (tissue samples).

Use the Type / Source filters, the search box, and column sorting to explore; each CAN-IMMUNE ID opens the full mutation & peptide view.

IDSampleTranscriptAA Change CDSTypeSourcePeptide