Stats by Source
Total, split by cell line (COSMIC CL / DepMap / PubMed) vs tissue (COSMIC primary tissue)
Total = all mutations for this gene across every source.
Cell line = COSMIC Cell Lines Project + DepMap + PubMed.
Tissue = COSMIC primary-tissue (patient tumour) samples.
Total can exceed cell line + tissue: COSMIC tissue-derived models sit only in global, and a peptide can be shared across both.
| Total | Cell line | Tissue | |
|---|---|---|---|
| Mutations | 1,902 | 252 | 1,632 |
| Samples | 487 | 92 | 388 |
| Peptides | 381 | 66 | 319 |
Function
RASAL1 · RAS protein activator like 1
The protein encoded by this gene is member of the GAP1 family of GTPase-activating proteins. These proteins stimulate the GTPase activity of normal RAS p21 but not its oncogenic counterpart. Acting as a suppressor of RAS function, the protein enhances the weak intrinsic GTPase activity of RAS proteins resulting in the inactive GDP-bound form of RAS, thereby allowing control of cellular proliferation and differentiation. This particular family member contains domains which are characteristic of the GAP1 subfamily of RasGAP proteins but, in contrast to the other GAP1 family members, this protein is strongly and selectively expressed in endocrine tissues. Alternatively spliced transcript variants that encode different isoforms have been described [provided by RefSeq, Jul 2010].
Isoforms & Proteins
4 transcripts · UniProt mapping is sequence-verified (AA-safe)
Each Ensembl transcript (ENST) this gene is mutated on, with its matched UniProt accession.
The mapping is sequence-verified: the UniProt sequence is identical to the transcript translation, so amino-acid positions line up exactly. A * marks an unreviewed (TrEMBL) entry.
Counts are mutations and unique mutant peptides on each transcript.
Gene Properties
Recurrent Mutations
All 351 amino-acid changes on canonical ENST00000548055 · needle height = samples · drag the mini-map to zoom
A lollipop / needle plot – the standard way to show recurrent mutations along a protein (as used by cBioPortal and MutationMapper).
X-axis = amino-acid position in the protein.
Needle height & head size = how often that exact amino-acid change was observed (its recurrence). Tall/large heads are mutational hotspots.
The most recurrent changes are labelled; hover any needle for the change, position and counts.
Mutation frequency across cancer types
% of samples with a missense/complex mutation in RASAL1 · cell line vs tissue
For each cancer type, the fraction of samples that carry at least one missense/complex mutation anywhere in RASAL1 – counted as distinct samples (a sample counts once no matter how many mutations it has).
Split into cell line and tissue; each cell shows mutated / total and the percentage. Cohorts with <20 samples are omitted. Ordered by combined frequency.
| Cancer type | Cell lines | Tissue samples |
|---|---|---|
| T-Lymphoblastic Leukemia | 4/40 10% | 0/0 0% |
| Endometrial Carcinoma | 8/42 19% | 25/612 4% |
| Gastrointestinal Stromal Tumour | 0/0 0% | 6/133 5% |
| Acute Myeloid Leukemia | 4/90 4% | 0/0 0% |
| Melanoma | 7/210 3% | 59/1899 3% |
| Glioblastoma | 3/98 3% | 0/0 0% |
| Hodgkins Lymphoma | 2/16 12% | 2/122 2% |
| Squamous Cell Lung Carcinoma | 4/57 7% | 19/810 2% |
| Bladder Carcinoma | 2/58 3% | 17/956 2% |
| Burkitts Lymphoma | 2/32 6% | 2/196 1% |
| Non-Small Cell Lung Carcinoma | 10/304 3% | 19/1390 1% |
| Colorectal Carcinoma | 4/143 3% | 49/3239 2% |
| Cervical Carcinoma | 0/35 0% | 7/422 2% |
| Pheochromocytoma and Paraganglioma | 0/0 0% | 1/71 1% |
| Neuroendocrine Tumour | 7/154 5% | 3/577 1% |
| Mesothelioma | 3/62 5% | 0/165 0% |
| Thyroid Gland Carcinoma | 0/45 0% | 21/1592 1% |
| Small Cell Lung Carcinoma | 0/9 0% | 9/752 1% |
| Gastric Carcinoma | 2/74 3% | 19/1809 1% |
| Rhabdomyosarcoma | 1/33 3% | 1/171 1% |
| Osteosarcoma | 1/45 2% | 1/166 1% |
| Other Solid Cancers | 0/94 0% | 15/1515 1% |
| Biliary Tract Carcinoma | 1/54 2% | 8/950 1% |
| Ovarian Carcinoma | 0/109 0% | 9/998 1% |
| Esophageal Squamous Cell Carcinoma | 2/51 4% | 18/2550 1% |
| Esophageal Carcinoma | 0/23 0% | 6/769 1% |
| Medulloblastoma | 0/0 0% | 3/450 1% |
| Prostate Carcinoma | 2/13 15% | 12/2105 1% |
| Hepatocellular Carcinoma | 0/46 0% | 14/2210 1% |
| Head and Neck Carcinoma | 2/85 2% | 7/1574 0% |
Mutation Distribution
Where RASAL1 is mutated · all tissues, split by cell line vs tissue
How many mutations in RASAL1 were found in each tissue, across the whole database.
Each bar is a tissue (cell-line and tissue names are merged to the standard tissue), split into cell line and tissue (patient tumour) contributions.
This shows the cancer-context where this gene is recurrently altered.
GTEx Expression
Median TPM across 54 healthy tissues
Median gene expression (TPM) in normal, non-cancer human tissues from the GTEx project.
Useful for judging tumour specificity – a strong neoantigen target ideally comes from a gene with low expression in healthy tissues.
Scroll or drag the mini-axis below the chart to browse all tissues.
Mutations
All 1,902 mutations in RASAL1
Every mutation record for this gene, across all samples and sources.
The Sample column links to the cell line (cell-line samples) or the tissue type (tissue samples).
Use the Type / Source filters, the search box, and column sorting to explore; each CAN-IMMUNE ID opens the full mutation & peptide view.
| ID | Sample | Transcript | AA Change | CDS | Type | Source | Mutant Peptide | Wild-type Peptide |
|---|