Stats by Source
Total, split by cell line (COSMIC CL / DepMap / PubMed) vs tissue (COSMIC primary tissue)
Total = all mutations for this gene across every source.
Cell line = COSMIC Cell Lines Project + DepMap + PubMed.
Tissue = COSMIC primary-tissue (patient tumour) samples.
Total can exceed cell line + tissue: COSMIC tissue-derived models sit only in global, and a peptide can be shared across both.
| Total | Cell line | Tissue | |
|---|---|---|---|
| Mutations | 1,826 | 213 | 1,592 |
| Samples | 597 | 107 | 484 |
| Peptides | 457 | 72 | 385 |
Function
STK36 · Serine/threonine kinase 36
This gene encodes a member of the serine/threonine kinase family of enzymes. This family member is similar to a Drosophila protein that plays a key role in the Hedgehog signaling pathway. This human protein is a positive regulator of the GLI zinc-finger transcription factors. Knockout studies of the homologous mouse gene suggest that defects in this human gene may lead to congenital hydrocephalus, possibly due to a functional defect in motile cilia. Because Hedgehog signaling is frequently activated in certain kinds of gastrointestinal cancers, it has been suggested that this gene is a target for the treatment of these cancers. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, Aug 2011].
Isoforms & Proteins
3 transcripts · UniProt mapping is sequence-verified (AA-safe)
Each Ensembl transcript (ENST) this gene is mutated on, with its matched UniProt accession.
The mapping is sequence-verified: the UniProt sequence is identical to the transcript translation, so amino-acid positions line up exactly. A * marks an unreviewed (TrEMBL) entry.
Counts are mutations and unique mutant peptides on each transcript.
Gene Properties
Recurrent Mutations
All 453 amino-acid changes on canonical ENST00000295709 · needle height = samples · drag the mini-map to zoom
A lollipop / needle plot – the standard way to show recurrent mutations along a protein (as used by cBioPortal and MutationMapper).
X-axis = amino-acid position in the protein.
Needle height & head size = how often that exact amino-acid change was observed (its recurrence). Tall/large heads are mutational hotspots.
The most recurrent changes are labelled; hover any needle for the change, position and counts.
Mutation frequency across cancer types
% of samples with a missense/complex mutation in STK36 · cell line vs tissue
For each cancer type, the fraction of samples that carry at least one missense/complex mutation anywhere in STK36 – counted as distinct samples (a sample counts once no matter how many mutations it has).
Split into cell line and tissue; each cell shows mutated / total and the percentage. Cohorts with <20 samples are omitted. Ordered by combined frequency.
| Cancer type | Cell lines | Tissue samples |
|---|---|---|
| T-Lymphoblastic Leukemia | 6/40 15% | 0/0 0% |
| Melanoma | 8/210 4% | 82/1899 4% |
| Endometrial Carcinoma | 6/42 14% | 19/612 3% |
| Oral Cavity Carcinoma | 2/54 4% | 0/0 0% |
| Rhabdomyosarcoma | 0/33 0% | 6/171 4% |
| Colorectal Carcinoma | 16/143 11% | 61/3239 2% |
| Other Solid Cancers | 1/94 1% | 33/1515 2% |
| Non-Small Cell Lung Carcinoma | 15/304 5% | 20/1390 1% |
| Cervical Carcinoma | 0/35 0% | 9/422 2% |
| Bladder Carcinoma | 2/58 3% | 18/956 2% |
| Ovarian Carcinoma | 7/109 6% | 14/998 1% |
| Gastric Carcinoma | 1/74 1% | 33/1809 2% |
| Squamous Cell Lung Carcinoma | 0/57 0% | 15/810 2% |
| Other Sarcomas | 6/69 9% | 6/699 1% |
| Neuroendocrine Tumour | 2/154 1% | 9/577 2% |
| Gastrointestinal Stromal Tumour | 0/0 0% | 2/133 2% |
| Pheochromocytoma and Paraganglioma | 0/0 0% | 1/71 1% |
| Hepatocellular Carcinoma | 1/46 2% | 27/2210 1% |
| Ewings Sarcoma | 3/63 5% | 1/262 0% |
| Plasma Cell Myeloma | 3/44 7% | 1/305 0% |
| Non-Cancerous | 2/104 2% | 7/830 1% |
| Biliary Tract Carcinoma | 1/54 2% | 8/950 1% |
| Adrenocortical Carcinoma | 1/3 33% | 0/112 0% |
| Thyroid Gland Carcinoma | 1/45 2% | 13/1592 1% |
| Small Cell Lung Carcinoma | 0/9 0% | 6/752 1% |
| Glioma | 2/52 4% | 14/2127 1% |
| Head and Neck Carcinoma | 2/85 2% | 10/1574 1% |
| Neuroblastoma | 2/87 2% | 8/1331 1% |
| Prostate Carcinoma | 5/13 38% | 7/2105 0% |
| Germ Cell Tumour | 0/25 0% | 1/169 1% |
Mutation Distribution
Where STK36 is mutated · all tissues, split by cell line vs tissue
How many mutations in STK36 were found in each tissue, across the whole database.
Each bar is a tissue (cell-line and tissue names are merged to the standard tissue), split into cell line and tissue (patient tumour) contributions.
This shows the cancer-context where this gene is recurrently altered.
GTEx Expression
Median TPM across 54 healthy tissues
Median gene expression (TPM) in normal, non-cancer human tissues from the GTEx project.
Useful for judging tumour specificity – a strong neoantigen target ideally comes from a gene with low expression in healthy tissues.
Scroll or drag the mini-axis below the chart to browse all tissues.
Mutations
All 1,826 mutations in STK36
Every mutation record for this gene, across all samples and sources.
The Sample column links to the cell line (cell-line samples) or the tissue type (tissue samples).
Use the Type / Source filters, the search box, and column sorting to explore; each CAN-IMMUNE ID opens the full mutation & peptide view.
| ID | Sample | Transcript | AA Change | CDS | Type | Source | Mutant Peptide | Wild-type Peptide |
|---|